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lme4a log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2013-02-15-08-50/RF_PKG_CHECK/PKGS/lme4a.Rcheck'
* using R version 2.15.2 Patched (2013-01-31 r61797)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using options '--no-examples --no-tests --no-vignettes'
* checking for file 'lme4a/DESCRIPTION' ... OK
* this is package 'lme4a' version '0.9996875-1'
* checking CRAN incoming feasibility ... NOTE
Maintainer: ''
New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking whether package 'lme4a' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... WARNING
Error: .onLoad failed in loadNamespace() for 'lme4a', details:
  call: value[[3L]](cond)
  error: failed to load module lme4 from package lme4a
could not find function "getClass"
In addition: Warning message:
No function found corresponding to methods exports from 'MatrixModels' for: 'show' 
Execution halted

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... WARNING
Error: .onLoad failed in loadNamespace() for 'lme4a', details:
  call: value[[3L]](cond)
  error: failed to load module lme4 from package lme4a
could not find function "getClass"
In addition: Warning message:
No function found corresponding to methods exports from 'MatrixModels' for: 'show' 
Execution halted

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
anova.merMod: warning in pchisq(chisq, dfChisq, lower = FALSE): partial
  argument match of 'lower' to 'lower.tail'
anovaLmer: warning in pchisq(chisq, dfChisq, lower = FALSE): partial
  argument match of 'lower' to 'lower.tail'
bootMer: warning in matrix(t0, nr = length(t0), nc = nsim): partial
  argument match of 'nr' to 'nrow'
bootMer: warning in matrix(t0, nr = length(t0), nc = nsim): partial
  argument match of 'nc' to 'ncol'
formatVC: warning in matrix("", nr = nrow(reMat) - nrow(corr), nc =
  ncol(corr)): partial argument match of 'nr' to 'nrow'
formatVC: warning in matrix("", nr = nrow(reMat) - nrow(corr), nc =
  ncol(corr)): partial argument match of 'nc' to 'ncol'
mkReTrms : mkBlist: warning in matrix(seq_len(nc * nl), nc = nl, byrow
  = TRUE): partial argument match of 'nc' to 'ncol'
mkReTrms : : warning in matrix(seq_len(nb[i]), nc = nc[i],
  byrow = TRUE): partial argument match of 'nc' to 'ncol'
plot.lmList.confint: warning in gl(dd[3], dd[1] * dd[2], len = ll, lab
  = dn[[3]]): partial argument match of 'len' to 'length'
plot.lmList.confint: warning in gl(dd[3], dd[1] * dd[2], len = ll, lab
  = dn[[3]]): partial argument match of 'lab' to 'labels'
plot.lmList.confint: warning in gl(dd[2], dd[1], len = ll): partial
  argument match of 'len' to 'length'
print.merMod: warning in abbreviate(rn, minlen = 11): partial argument
  match of 'minlen' to 'minlength'
print.merMod: warning in matrix(format(round(corF@x, 3), nsmall = 3),
  nc = p, dimnames = list(rns, abbreviate(rn, minlen = 6))): partial
  argument match of 'nc' to 'ncol'
print.merMod: warning in abbreviate(rn, minlen = 6): partial argument
  match of 'minlen' to 'minlength'
print.summary.mer: warning in abbreviate(rn, minlen = 11): partial
  argument match of 'minlen' to 'minlength'
print.summary.mer: warning in matrix(format(round(corF@x, 3), nsmall =
  3), nc = p, dimnames = list(rns, abbreviate(rn, minlen = 6))):
  partial argument match of 'nc' to 'ncol'
print.summary.mer: warning in abbreviate(rn, minlen = 6): partial
  argument match of 'minlen' to 'minlength'
printMerenv: warning in abbreviate(rn, minlen = 11): partial argument
  match of 'minlen' to 'minlength'
printMerenv: warning in matrix(format(round(corF@x, 3), nsmall = 3), nc
  = p, dimnames = list(rns, abbreviate(rn, minlen = 6))): partial
  argument match of 'nc' to 'ncol'
printMerenv: warning in abbreviate(rn, minlen = 6): partial argument
  match of 'minlen' to 'minlength'
profile.merMod: warning in matrix(res, nr = maxpts, nc = length(res),
  dimnames = list(NULL, names(res)), byrow = TRUE): partial argument
  match of 'nr' to 'nrow'
profile.merMod: warning in matrix(res, nr = maxpts, nc = length(res),
  dimnames = list(NULL, names(res)), byrow = TRUE): partial argument
  match of 'nc' to 'ncol'
ranef.merMod: warning in matrix(ml[[i]], nc = nc[i], byrow = TRUE,
  dimnames = list(NULL, cnms[[i]])): partial argument match of 'nc' to
  'ncol'
simulate.merMod: warning in matrix(rnorm(q * nsim), nc = nsim): partial
  argument match of 'nc' to 'ncol'
simulate.merMod: warning in matrix(rnorm(n * nsim), nc = nsim): partial
  argument match of 'nc' to 'ncol'
splom.thpr : dp: warning in panel.axis(side = side, at = at, labels =
  format(at, trim = TRUE), tick = TRUE, check.overlap = TRUE, half =
  side == "top" && j > 1, tck = 1, rot = 0, text.col = axis.text.col,
  text.alpha = axis.text.alpha, text.cex = axis.text.cex, text.font =
  axis.text.font, text.fontfamily = axis.text.fontfamily, text.fontface
  = axis.text.fontface, line.col = axis.line.col, line.alpha =
  axis.line.alpha, line.lty = axis.line.lty, line.lwd = axis.line.lwd):
  partial argument match of 'tick' to 'ticks'
splom.thpr : dp: warning in panel.axis(side = side, at = at, labels =
  format(at, trim = TRUE), tick = TRUE, half = TRUE, which.half =
  which.half, tck = 1, rot = 0, text.col = axis.text.col, text.alpha =
  axis.text.alpha, text.cex = axis.text.cex, text.font =
  axis.text.font, text.fontfamily = axis.text.fontfamily, text.fontface
  = axis.text.fontface, line.col = axis.line.col, line.alpha =
  axis.line.alpha, line.lty = axis.line.lty, line.lwd = axis.line.lwd):
  partial argument match of 'tick' to 'ticks'
updateMod: warning in determinant(fe@fac, log = TRUE): partial argument
  match of 'log' to 'logarithm'
getME: no visible binding for global variable '....'
getME: no visible binding for global variable '.....re'
getME: no visible binding for global variable '....re'
log.thpr: no visible binding for global variable '.par'
splom.thpr: no visible binding for global variable '.par'
varianceProf: no visible binding for global variable '.par'
varpr: no visible binding for global variable '.par'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  'VarCorr'
All user-level objects in a package should have documentation entries.
See the chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... SKIPPED
* checking for unstated dependencies in tests ... OK
* checking tests ... SKIPPED
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There were 3 warnings.
NOTE: There were 2 notes.
See
  'R:/run/building/build_2013-02-15-08-50/RF_PKG_CHECK/PKGS/lme4a.Rcheck/00check.log'
for details.

Run time: 277.47 seconds.
Additional Logs:   00install.out
Thanks to:
Vienna University of Economics and Business Powered By FusionForge