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lme4a log file (00install.out)
* installing *source* package ‘lme4a’ ...
** libs
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c Gauss_Hermite.cpp -o Gauss_Hermite.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c MatrixNs.cpp -o MatrixNs.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c Module.cpp -o Module.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c Permutation.cpp -o Permutation.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c deFeMod.cpp -o deFeMod.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c external.cpp -o external.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c glmFamily.cpp -o glmFamily.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c init.cpp -o init.o
gcc -std=gnu99 -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c local_stubs.c -o local_stubs.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c predModules.cpp -o predModules.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c reModule.cpp -o reModule.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c reTrms.cpp -o reTrms.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c respModule.cpp -o respModule.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c spFeMod.cpp -o spFeMod.o
g++ -I/srv/R/R-patched/build.13-02-14/include -DNDEBUG -I/usr/local/include -I"/home/rforge/lib/R/2.15/Matrix/include" -I"/home/rforge/lib/R/2.15/Rcpp/include" -fpic -g -O2 -c utilities.cpp -o utilities.o
g++ -shared -L/usr/local/lib -o lme4a.so Gauss_Hermite.o MatrixNs.o Module.o Permutation.o deFeMod.o external.o glmFamily.o init.o local_stubs.o predModules.o reModule.o reTrms.o respModule.o spFeMod.o utilities.o -L/home/rforge/lib/R/2.15/Rcpp/lib -lRcpp -Wl,-rpath,/home/rforge/lib/R/2.15/Rcpp/lib -L/srv/R/R-patched/build.13-02-14/lib -lRlapack -L/srv/R/R-patched/build.13-02-14/lib -lRblas -lgfortran -lm -lquadmath -L/srv/R/R-patched/build.13-02-14/lib -lR
installing to /mnt/building/build_2013-02-15-08-50/RF_PKG_CHECK/PKGS/lme4a.Rcheck/lme4a/libs
** R
** data
** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
in method for ‘coerce’ with signature ‘"Rcpp_reModule","reModule"’: no definition for class “Rcpp_reModule”
in method for ‘coerce’ with signature ‘"Rcpp_deFeMod","deFeMod"’: no definition for class “Rcpp_deFeMod”
in method for ‘coerce’ with signature ‘"Rcpp_lmerResp","lmerResp"’: no definition for class “Rcpp_lmerResp”
in method for ‘show’ with signature ‘"Rcpp_lmerResp"’: no definition for class “Rcpp_lmerResp”
in method for ‘show’ with signature ‘"Rcpp_glmerResp"’: no definition for class “Rcpp_glmerResp”
in method for ‘show’ with signature ‘"Rcpp_reModule"’: no definition for class “Rcpp_reModule”
in method for ‘show’ with signature ‘"Rcpp_deFeMod"’: no definition for class “Rcpp_deFeMod”
** help
*** installing help indices
** building package indices
** installing vignettes
‘PLSvGLS.Rnw’
‘Theory.Rnw’
** testing if installed package can be loaded
* DONE (lme4a)
