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depmix log file (build_win64)
Wed Jan 15 16:57:58 2020: Building binary for package depmix (SVN revision 684)
using R version 3.6.2 Patched (2019-12-28 r77627) ...
* installing to library 'R:/lib/local/3.6'
* installing *source* package 'depmix' ...
** using staged installation
** libs
*** arch - i386
c:/Rtools/mingw_32/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O3 -Wall -std=gnu99 -mtune=generic -c depmix_init.c -o depmix_init.o
c:/Rtools/mingw_32/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O3 -Wall -std=gnu99 -mtune=generic -c derdist.c -o derdist.o
c:/Rtools/mingw_32/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O3 -Wall -std=gnu99 -mtune=generic -c hessdist.c -o hessdist.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c logl.cc -o logl.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c matrix.cc -o matrix.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mdmm.cc -o mdmm.o
mdmm.cc: In member function 'int mdmm::itemnr(int)':
mdmm.cc:362:6: warning: variable 'prev' set but not used [-Wunused-but-set-variable]
int prev=colnr;
^
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mgdmm.cc -o mgdmm.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mmts.cc -o mmts.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mts.cc -o mts.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o depmix.dll tmp.def depmix_init.o derdist.o hessdist.o logl.o matrix.o mdmm.o mgdmm.o mmts.o mts.o -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/i386 -lR
installing to R:/lib/local/3.6/00LOCK-depmix/00new/depmix/libs/i386
*** arch - x64
c:/Rtools/mingw_64/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -std=gnu99 -mtune=generic -c depmix_init.c -o depmix_init.o
c:/Rtools/mingw_64/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -std=gnu99 -mtune=generic -c derdist.c -o derdist.o
c:/Rtools/mingw_64/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -std=gnu99 -mtune=generic -c hessdist.c -o hessdist.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c logl.cc -o logl.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c matrix.cc -o matrix.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mdmm.cc -o mdmm.o
mdmm.cc: In member function 'int mdmm::itemnr(int)':
mdmm.cc:362:6: warning: variable 'prev' set but not used [-Wunused-but-set-variable]
int prev=colnr;
^
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mgdmm.cc -o mgdmm.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mmts.cc -o mmts.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mts.cc -o mts.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o depmix.dll tmp.def depmix_init.o derdist.o hessdist.o logl.o matrix.o mdmm.o mgdmm.o mmts.o mts.o -LR:/base/local215/lib/x64 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/x64 -lR
installing to R:/lib/local/3.6/00LOCK-depmix/00new/depmix/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'depmix'
finding HTML links ... done
depmix-internal html
discrimination html
dmm html
fitdmm html
generate html
markovdata html
Rd warning: R:/tmp/RtmpALQsF5/R.INSTALLa7880171b2/depmix/man/markovdata.Rd:124: file link 'depmix' in package 'depmix' does not exist and so has been treated as a topic
mgdmm html
mixdmm html
speed html
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'depmix' as depmix_0.9.16.zip
* DONE (depmix)
Run time: 14.07 seconds.