R Development Page

mosaicManip log file (check_x86_64_linux)

Fri Feb 15 13:56:01 2013: Checking package mosaicManip (SVN revision 635) ...
* using log directory ‘/mnt/building/build_2013-02-15-08-50/RF_PKG_CHECK/PKGS/mosaicManip.Rcheck’
* using R version 2.15.2 Patched (2013-02-13 r61942)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘mosaicManip/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘mosaicManip’ version ‘0.2-6’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Daniel Kaplan , Randall Pruim
’
New submission
Package was archived on CRAN
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package suggested but not available for checking: ‘manipulate’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking whether package ‘mosaicManip’ can be installed ... [3s/7s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
mInfluence : myFun : panel.mInfluence: warning in panel.xyplot(x, y,
  group = groups, ...): partial argument match of 'group' to 'groups'
.mEulerIntegrate.core : draw.state: no visible binding for '<<-'
  assignment to ‘..thisfun’
.mEulerIntegrate.core: no visible global function definition for
  ‘manipulate’
.mEulerIntegrate.core: no visible binding for global variable ‘dynfun’
.mEulerIntegrate.core: no visible binding for global variable ‘xval0’
.mEulerIntegrate.core: no visible binding for global variable ‘ntraj’
.mEulerIntegrate.core: no visible binding for global variable ‘go’
.mEulerIntegrate.core: no visible binding for global variable ‘restart’
.mEulerIntegrate.core: no visible binding for global variable ‘nsteps’
.mEulerIntegrate.core: no visible binding for global variable ‘showeq’
.mEulerIntegrate.core: no visible binding for global variable ‘editfun’
.mEulerIntegrate.core: no visible global function definition for
  ‘picker’
.mEulerIntegrate.core: no visible global function definition for
  ‘button’
.mEulerIntegrate.core: no visible global function definition for
  ‘slider’
.mEulerIntegrate.core: no visible global function definition for
  ‘checkbox’
.mGradSearch.core: no visible global function definition for
  ‘.requireManipulate’
.mGradSearch.core: no visible binding for '<<-' assignment to
  ‘.global.fun’
.mGradSearch.core: no visible binding for '<<-' assignment to ‘ptsX’
.mGradSearch.core: no visible binding for '<<-' assignment to ‘ptsY’
.mGradSearch.core : drawState: no visible binding for global variable
  ‘ptsX’
.mGradSearch.core : drawState: no visible binding for global variable
  ‘ptsY’
.mGradSearch.core : drawState: no visible binding for '<<-' assignment
  to ‘ptsX’
.mGradSearch.core : drawState: no visible binding for '<<-' assignment
  to ‘ptsY’
.mGradSearch.core : drawState: no visible global function definition
  for ‘manipulatorMouseClick’
.mGradSearch.core: no visible global function definition for
  ‘manipulate’
.mGradSearch.core: no visible binding for global variable ‘ty’
.mGradSearch.core: no visible binding for global variable ‘trans’
.mGradSearch.core: no visible binding for global variable ‘cent’
.mGradSearch.core: no visible binding for global variable ‘contours’
.mGradSearch.core: no visible global function definition for ‘picker’
.mGradSearch.core: no visible global function definition for ‘slider’
.mGradSearch.core: no visible global function definition for ‘button’
.mGradSearch.core: no visible global function definition for ‘checkbox’
mApproxPoly2: no visible global function definition for ‘manipulate’
mApproxPoly2: no visible binding for global variable ‘xpt’
mApproxPoly2: no visible binding for global variable ‘ypt’
mApproxPoly2: no visible binding for global variable ‘radius’
mApproxPoly2: no visible binding for global variable ‘const’
mApproxPoly2: no visible binding for global variable ‘xyes’
mApproxPoly2: no visible binding for global variable ‘yyes’
mApproxPoly2: no visible binding for global variable ‘xyyes’
mApproxPoly2: no visible binding for global variable ‘xsqyes’
mApproxPoly2: no visible binding for global variable ‘ysqyes’
mApproxPoly2: no visible binding for global variable ‘myalpha’
mApproxPoly2: no visible binding for global variable ‘npts’
mApproxPoly2: no visible global function definition for ‘slider’
mApproxPoly2: no visible global function definition for ‘checkbox’
mBayesBinom: no visible global function definition for ‘manipulate’
mBayesBinom: no visible binding for global variable ‘pick.prior’
mBayesBinom: no visible binding for global variable ‘samp.size’
mBayesBinom: no visible binding for global variable ‘log.yaxis’
mBayesBinom: no visible global function definition for ‘picker’
mBayesBinom: no visible global function definition for ‘slider’
mBayesBinom: no visible global function definition for ‘checkbox’
mBias: no visible global function definition for ‘slider’
mBias: no visible global function definition for ‘checkbox’
mBias: no visible global function definition for ‘manipulate’
mBias: no visible binding for global variable ‘n’
mBias: no visible binding for global variable ‘seed’
mBias: no visible binding for global variable ‘use.orig’
mCIprop: no visible global function definition for ‘manipulate’
mCIprop: no visible binding for global variable ‘n’
mCIprop: no visible binding for global variable ‘conf.level’
mCIprop: no visible binding for global variable ‘p’
mCIprop: no visible binding for global variable ‘ntrials’
mCIprop: no visible binding for global variable ‘seed’
mCIprop: no visible binding for global variable ‘int.type’
mCIprop: no visible global function definition for ‘slider’
mCIprop: no visible global function definition for ‘picker’
mCIt: no visible global function definition for ‘manipulate’
mCIt: no visible binding for global variable ‘N’
mCIt: no visible binding for global variable ‘SAMPLES’
mCIt: no visible binding for global variable ‘DIST’
mCIt: no visible binding for global variable ‘cover’
mCIt: no visible binding for global variable ‘WIDTH’
mCIt: no visible global function definition for ‘slider’
mCIt: no visible global function definition for ‘picker’
mDensity: no visible global function definition for ‘slider’
mDensity: no visible global function definition for ‘picker’
mDensity: no visible global function definition for ‘manipulate’
mDensity: no visible binding for global variable ‘bandwidth’
mDensity: no visible binding for global variable ‘trans’
mDensity: no visible binding for global variable ‘seed’
mDensity: no visible binding for global variable ‘npts’
mDerivs : myplot : antiFpanel: no visible binding for global variable
  ‘pos’
mDerivs: no visible global function definition for ‘manipulate’
mDerivs: no visible binding for global variable ‘xpos’
mDerivs: no visible binding for global variable ‘from’
mDerivs: no visible binding for global variable ‘der’
mDerivs: no visible binding for global variable ‘anti’
mDerivs: no visible binding for global variable ‘fixed’
mDerivs: no visible binding for global variable ‘cfun’
mDerivs: no visible global function definition for ‘picker’
mDerivs: no visible global function definition for ‘slider’
mDerivs: no visible global function definition for ‘checkbox’
mEcon: no visible global function definition for ‘manipulate’
mEcon: no visible binding for global variable ‘sup1’
mEcon: no visible binding for global variable ‘sup2’
mEcon: no visible binding for global variable ‘dem1’
mEcon: no visible binding for global variable ‘dem2’
mEcon: no visible global function definition for ‘slider’
mFit: no visible global function definition for ‘checkbox’
mFit: no visible global function definition for ‘slider’
mFit: no visible global function definition for ‘manipulate’
mFit: no visible binding for global variable ‘k’
mFit: no visible binding for global variable ‘n’
mFit: no visible binding for global variable ‘P’
mGlassPattern: no visible global function definition for ‘manipulate’
mGlassPattern: no visible binding for global variable ‘mag’
mGlassPattern: no visible binding for global variable ‘dmag’
mGlassPattern: no visible binding for global variable ‘rot’
mGlassPattern: no visible binding for global variable ‘xtrans’
mGlassPattern: no visible binding for global variable ‘ytrans’
mGlassPattern: no visible global function definition for ‘slider’
mGrad: no visible global function definition for ‘manipulate’
mGrad: no visible binding for global variable ‘npts’
mGrad: no visible binding for global variable ‘delta’
mGrad: no visible binding for global variable ‘col.scheme’
mGrad: no visible binding for global variable ‘show.grad’
mGrad: no visible binding for global variable ‘show.x’
mGrad: no visible binding for global variable ‘show.y’
mGrad: no visible global function definition for ‘checkbox’
mGrad: no visible global function definition for ‘slider’
mGrad: no visible global function definition for ‘picker’
mHist: no visible binding for '<<-' assignment to ‘oldBreaks’
mHist : myFun : myPan: no visible binding for global variable
  ‘oldBreaks’
mHist : myFun: no visible binding for '<<-' assignment to ‘oldBreaks’
mHist: no visible global function definition for ‘slider’
mHist: no visible binding for global variable ‘x’
mHist: no visible global function definition for ‘manipulate’
mHist: no visible binding for global variable ‘nBands’
mHist: no visible binding for global variable ‘cBreak’
mHist: no visible binding for global variable ‘seed’
mHypTest: no visible global function definition for ‘slider’
mHypTest: no visible global function definition for ‘checkbox’
mHypTest : drawIt: multiple local function definitions for ‘dnorm’ with
  different formal arguments
mHypTest : drawIt: multiple local function definitions for ‘pnorm’ with
  different formal arguments
mHypTest : drawIt: multiple local function definitions for ‘qnorm’ with
  different formal arguments
mHypTest: no visible global function definition for ‘manipulate’
mHypTest: no visible binding for global variable ‘effect’
mHypTest: no visible binding for global variable ‘n’
mHypTest: no visible binding for global variable ‘m’
mHypTest: no visible binding for global variable ‘show.alt’
mInfluence: no visible global function definition for ‘picker’
mInfluence: no visible global function definition for ‘checkbox’
mInfluence: no visible global function definition for ‘slider’
mInfluence: no visible global function definition for ‘manipulate’
mInfluence: no visible binding for global variable ‘xpick’
mInfluence: no visible binding for global variable ‘multY’
mInfluence: no visible binding for global variable ‘multX’
mInfluence: no visible binding for global variable ‘newPoint’
mLM: no visible global function definition for ‘picker’
mLM: no visible global function definition for ‘checkbox’
mLM: no visible global function definition for ‘manipulate’
mLM: no visible binding for global variable ‘xname’
mLinAlgebra: no visible global function definition for ‘slider’
mLinAlgebra: no visible global function definition for ‘checkbox’
mLinAlgebra: no visible global function definition for ‘picker’
mLinAlgebra: no visible global function definition for ‘manipulate’
mLinAlgebra: no visible binding for global variable ‘az’
mLinAlgebra: no visible binding for global variable ‘lookdown’
mLinAlgebra: no visible binding for global variable ‘hint’
mLineFit: no visible global function definition for ‘manipulate’
mLineFit: no visible global function definition for ‘slider’
mLineFit: no visible global function definition for ‘checkbox’
mPP: no visible binding for global variable ‘predator.prey’
mPP : flowPlot: no visible binding for '<<-' assignment to
  ‘current.dyn.system’
mPP : jacobian: no visible binding for global variable
  ‘current.dyn.system’
mPP : doPlot: no visible global function definition for ‘solveDE’
mPP : doPlot : myPanel: no visible global function definition for
  ‘showNullclines’
mPP: no visible global function definition for ‘manipulate’
mPP: no visible binding for global variable ‘xstart’
mPP: no visible binding for global variable ‘ystart’
mPP: no visible binding for global variable ‘Ntraj’
mPP: no visible binding for global variable ‘tdur’
mPP: no visible binding for global variable ‘tback’
mPP: no visible binding for global variable ‘nullclines’
mPP: no visible binding for global variable ‘reviseWhat’
mPP: no visible binding for global variable ‘flowWhat’
mPP: no visible binding for global variable ‘doJacob’
mPP: no visible global function definition for ‘slider’
mPP: no visible global function definition for ‘picker’
mPP: no visible global function definition for ‘checkbox’
mPhaseLine: no visible global function definition for ‘manipulate’
mPhaseLine: no visible binding for global variable ‘x’
mPhaseLine: no visible binding for global variable ‘field’
mPhaseLine: no visible binding for global variable ‘npts’
mPhaseLine: no visible binding for global variable ‘showDyn’
mPhaseLine: no visible global function definition for ‘slider’
mPhaseLine: no visible global function definition for ‘checkbox’
mPower: no visible global function definition for ‘slider’
mPower: no visible global function definition for ‘manipulate’
mPower: no visible binding for global variable ‘mu’
mPower: no visible binding for global variable ‘sigma’
mPower: no visible binding for global variable ‘n’
mSDGame: no visible binding for '<<-' assignment to ‘iter’
mSDGame : myFun: no visible binding for global variable ‘iter’
mSDGame : myFun: no visible binding for '<<-' assignment to ‘iter’
mSDGame: no visible global function definition for ‘manipulate’
mSDGame: no visible binding for global variable ‘guess.sd’
mSDGame: no visible binding for global variable ‘myDist’
mSDGame: no visible binding for global variable ‘nxt’
mSDGame: no visible global function definition for ‘slider’
mSDGame: no visible global function definition for ‘picker’
mSDGame: no visible global function definition for ‘checkbox’
mSIR: no visible global function definition for ‘manipulate’
mSIR: no visible binding for global variable ‘probInfect’
mSIR: no visible binding for global variable ‘nContact’
mSIR: no visible binding for global variable ‘duration’
mSIR: no visible binding for global variable ‘initialI’
mSIR: no visible binding for global variable ‘births’
mSIR: no visible global function definition for ‘slider’
mTaylor: no visible global function definition for ‘manipulate’
mTaylor: no visible binding for global variable ‘a’
mTaylor: no visible binding for global variable ‘TaylorBeTrue’
mTaylor: no visible binding for global variable ‘lsquares’
mTaylor: no visible binding for global variable ‘xwid’
mTaylor: no visible binding for global variable ‘n’
mTaylor: no visible binding for global variable ‘err’
mTaylor: no visible binding for global variable ‘which.plot’
mTaylor: no visible global function definition for ‘picker’
mTaylor: no visible global function definition for ‘slider’
mTaylor: no visible global function definition for ‘checkbox’
mhistogram: no visible global function definition for ‘manipulate’
mhistogram: no visible binding for global variable ‘N’
mhistogram: no visible binding for global variable ‘FIT’
mhistogram: no visible global function definition for ‘slider’
mhistogram: no visible global function definition for ‘picker’
mpoly2 : showFun: no visible binding for '<<-' assignment to ‘.polyfun’
mpoly2: no visible global function definition for ‘manipulate’
mpoly2: no visible binding for global variable ‘a1’
mpoly2: no visible binding for global variable ‘a2’
mpoly2: no visible binding for global variable ‘a3’
mpoly2: no visible binding for global variable ‘a4’
mpoly2: no visible binding for global variable ‘a5’
mpoly2: no visible binding for global variable ‘a6’
mpoly2: no visible binding for global variable ‘xlim’
mpoly2: no visible binding for global variable ‘surface’
mpoly2: no visible global function definition for ‘slider’
mpoly2: no visible global function definition for ‘checkbox’
* checking Rd files ... NOTE
prepare_Rd: mPower.Rd:10-11: Dropping empty section \arguments
prepare_Rd: mSDGame.Rd:10-11: Dropping empty section \arguments
prepare_Rd: undocumented.Rd:20-21: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [1s/3s] OK
* checking PDF version of manual ... OK

NOTE: There were 4 notes.
See
  ‘/mnt/building/build_2013-02-15-08-50/RF_PKG_CHECK/PKGS/mosaicManip.Rcheck/00check.log’
for details.

Run time: 108.67 seconds.