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chords log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2016-04-20-11-44/RF_PKG_CHECK/PKGS/chords.Rcheck'
* using R version 3.2.5 Patched (2016-04-17 r70499)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'chords/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'chords' version '0.92.5'
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Jonathan Rosenblatt '

The Title field should be in title case, current version then in title case:
'Estimation in respondent driven samples.'
'Estimation in Respondent Driven Samples.'
* checking package namespace information ... OK
* checking package dependencies ... NOTE
  No repository set, so cyclic dependency check skipped
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'chords' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' call to 'Matrix' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
makeSparseMatrix: no visible global function definition for '%>%'
makeSparseMatrix: no visible global function definition for
  'sparseMatrix'
makeWeakStrongSample: no visible binding for global variable 'N.k'
makeWeakStrongSample: no visible binding for global variable 'lambda.k'
updateLambdaNetwork: no visible global function definition for '%>%<-'
updateLambdaNetwork: no visible binding for global variable 'result'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... WARNING
Codoc mismatches from documentation object 'estimate.b.k':
estimate.b.k
  Code: function(rds.object, const = 1, impute.Nks = "jeff", silent =
                 TRUE)
  Docs: function(rds.object, const = 1, impute.Nks = TRUE)
  Argument names in code not in docs:
    silent
  Mismatches in argument default values:
    Name: 'impute.Nks' Code: "jeff" Docs: TRUE

* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... ERROR
Running examples in 'chords-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: estimate.b.k
> ### Title: Estimate population size from RDS sample
> ### Aliases: estimate.b.k
> 
> ### ** Examples
> 
> # Import data in RDS file format:
> data(brazil)
> # Initialize RDS object:
> rds.object2<- initializeRdsObject(brazil)
Warning in initializeRdsObject(brazil) :
  Non unique interview times. Ignoring and proceeding...
> # Estimate:
> rds.object2$estimates <- estimate.b.k(rds.object = rds.object2 )
Error in value[[3L]](cond) : 
  argument "silent" is missing, with no default
Calls: estimate.b.k ... tryCatch -> tryCatchList -> tryCatchOne -> 
Execution halted
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 1 WARNING, 5 NOTEs
See
  'R:/run/building/build_2016-04-20-11-44/RF_PKG_CHECK/PKGS/chords.Rcheck/00check.log'
for details.

Run time: 28.11 seconds.