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indorigin log file (build_win64)

Fri Jul 31 19:51:02 2015: Building binary for package indorigin (SVN revision 126)
using R version 3.2.1 Patched (2015-07-29 r68755) ...

* installing to library 'R:/lib/local/3.2'
* installing *source* package 'indorigin' ...
** libs

*** arch - i386
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG    -I"R:/lib/local/3.2/Rcpp/include" -I"R:/lib/local/3.2/RcppArmadillo/include" -I"R:/base/local215/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG    -I"R:/lib/local/3.2/Rcpp/include" -I"R:/lib/local/3.2/RcppArmadillo/include" -I"R:/base/local215/include"     -O2 -Wall  -mtune=core2 -c pclt.cpp -o pclt.o
pclt.cpp: In function 'void pclt(double, double, double, arma::subview_col)':
pclt.cpp:145:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG    -I"R:/lib/local/3.2/Rcpp/include" -I"R:/lib/local/3.2/RcppArmadillo/include" -I"R:/base/local215/include"     -O2 -Wall  -mtune=core2 -c tree_sum.cpp -o tree_sum.o
In file included from tree_sum.cpp:8:0:
tree_sum.h: In constructor 'PhyConvolver::PhyConvolver(const int&, const int&, const bool&)':
tree_sum.h:113:12: warning: 'PhyConvolver::rescale' will be initialized after [-Wreorder]
tree_sum.h:110:15: warning:   'arma::mat PhyConvolver::transdist_0' [-Wreorder]
tree_sum.h:162:5: warning:   when initialized here [-Wreorder]
tree_sum.cpp: In function 'arma::mat convolveTree(const PhyTree&, const int&, const double&, const double&, const double&, const string&, bool)':
tree_sum.cpp:216:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
tree_sum.cpp: In function 'arma::mat AverageTreesConvolve(Rcpp::IntegerVector, Rcpp::IntegerVector, arma::mat, arma::imat, double, double, int, double, std::string, int)':
tree_sum.cpp:251:7: warning: unused variable 'numTrees' [-Wunused-variable]
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG    -I"R:/lib/local/3.2/Rcpp/include" -I"R:/lib/local/3.2/RcppArmadillo/include" -I"R:/base/local215/include"     -O2 -Wall  -mtune=core2 -c two_state_gibbs.cpp -o two_state_gibbs.o
two_state_gibbs.cpp: In function 'int sampleOnce(arma::colvec, double)':
two_state_gibbs.cpp:39:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m32 -shared -s -static-libgcc -o indorigin.dll tmp.def RcppExports.o pclt.o tree_sum.o two_state_gibbs.o -LR:/lib/R/R-patched/bin/i386 -lRlapack -LR:/lib/R/R-patched/bin/i386 -lRblas -lgfortran -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/i386 -lR
two_state_gibbs.o:two_state_gibbs.cpp:(.text+0x210): multiple definition of `Rcpp::RcppArmadillo::SampleReplace(Rcpp::Vector<13, Rcpp::PreserveStorage>&, int, int)'
tree_sum.o:tree_sum.cpp:(.text+0x4b0): first defined here
two_state_gibbs.o:two_state_gibbs.cpp:(.text+0x6e0): multiple definition of `Rcpp::RcppArmadillo::WalkerProbSampleReplace(Rcpp::Vector<13, Rcpp::PreserveStorage>&, int, int, arma::Col&)'
tree_sum.o:tree_sum.cpp:(.text+0x650): first defined here
two_state_gibbs.o:two_state_gibbs.cpp:(.text+0xab0): multiple definition of `Rcpp::RcppArmadillo::SampleNoReplace(Rcpp::Vector<13, Rcpp::PreserveStorage>&, int, int)'
tree_sum.o:tree_sum.cpp:(.text+0x510): first defined here
two_state_gibbs.o:two_state_gibbs.cpp:(.text+0xc90): multiple definition of `Rcpp::RcppArmadillo::FixProb(Rcpp::Vector<14, Rcpp::PreserveStorage>&, int, bool)'
tree_sum.o:tree_sum.cpp:(.text+0x4530): first defined here
two_state_gibbs.o:two_state_gibbs.cpp:(.text+0x9ca0): multiple definition of `Rcpp::RcppArmadillo::ProbSampleReplace(Rcpp::Vector<13, Rcpp::PreserveStorage>&, int, int, arma::Col&)'
tree_sum.o:tree_sum.cpp:(.text+0x4ea0): first defined here
two_state_gibbs.o:two_state_gibbs.cpp:(.text+0xa010): multiple definition of `Rcpp::RcppArmadillo::ProbSampleNoReplace(Rcpp::Vector<13, Rcpp::PreserveStorage>&, int, int, arma::Col&)'
tree_sum.o:tree_sum.cpp:(.text+0x5210): first defined here
collect2: ld returned 1 exit status
no DLL was created
ERROR: compilation failed for package 'indorigin'
* removing 'R:/lib/local/3.2/indorigin'
Run time: 27.67 seconds.